I tried stopping a v0.15.0.1 node about a minute after starting it. I had started it with an empty .bitcoin directory, and it hadn't synced any blocks at all, so I was intended to shut it down and give it a copy of a good peers.dat file so it could find a peer to sync from - but when I asked it to stop, it didn't.
gdb shows only 2 threads running:
Thread 2 (Thread 0x7f64a97fa700 (LWP 16304)):
[#0](/bitcoin-bitcoin/0/) 0x00007f64d414473d in connect () at ../sysdeps/unix/syscall-template.S:81
[#1](/bitcoin-bitcoin/1/) 0x00007f64cc10a306 in send_vc (statp=statp@entry=0x7f64a97fadb8, buf=buf@entry=0x7f64a97f7b60 "\367A\001", buflen=buflen@entry=42, buf2=buf2@entry=0x7f64a97f7b8c "\341+\001", buflen2=buflen2@entry=42, ansp=ansp@entry=0x7f64a97f79e8, anssizp=anssizp@entry=0x7f64a97f7b30, terrno=terrno@entry=0x7f64a97f79f0, ns=ns@entry=0, anscp=anscp@entry=0x7f64a97f8fe0, ansp2=ansp2@entry=0x7f64a97f8ff0, anssizp2=anssizp2@entry=0x7f64a97f8fa0, resplen2=resplen2@entry=0x7f64a97f8fb0, ansp2_malloced=ansp2_malloced@entry=0x7f64a97f8fc0) at res_send.c:793
[#2](/bitcoin-bitcoin/2/) 0x00007f64cc10b7a7 in __libc_res_nsend (statp=statp@entry=0x7f64a97fadb8, buf=buf@entry=0x7f64a97f7b60 "\367A\001", buflen=42, buf2=buf2@entry=0x7f64a97f7b8c "\341+\001", buflen2=buflen2@entry=42, ans=ans@entry=0x7f64a97f8770 "\341+\203\200", anssiz=anssiz@entry=2048, ansp=ansp@entry=0x7f64a97f8fe0, ansp2=ansp2@entry=0x7f64a97f8ff0, nansp2=nansp2@entry=0x7f64a97f8fa0, resplen2=resplen2@entry=0x7f64a97f8fb0, ansp2_malloced=ansp2_malloced@entry=0x7f64a97f8fc0) at res_send.c:566
[#3](/bitcoin-bitcoin/3/) 0x00007f64cc108e2c in __GI___libc_res_nquery (statp=statp@entry=0x7f64a97fadb8, name=name@entry=0x7f64a97f82f0 "x9.seed.bitcoinstats.com.", class=class@entry=1, type=type@entry=62321, answer=answer@entry=0x7f64a97f8770 "\341+\203\200", anslen=anslen@entry=2048, answerp=answerp@entry=0x7f64a97f8fe0, answerp2=answerp2@entry=0x7f64a97f8ff0, nanswerp2=nanswerp2@entry=0x7f64a97f8fa0, resplen2=resplen2@entry=0x7f64a97f8fb0, answerp2_malloced=answerp2_malloced@entry=0x7f64a97f8fc0) at res_query.c:227
[#4](/bitcoin-bitcoin/4/) 0x00007f64cc1099c5 in __libc_res_nquerydomain (answerp2_malloced=0x7f64a97f8fc0, resplen2=0x7f64a97f8fb0, nanswerp2=0x7f64a97f8fa0, answerp2=0x7f64a97f8ff0, answerp=0x7f64a97f8fe0, anslen=2048, answer=0x7f64a97f8770 "\341+\203\200", type=62321, class=1, domain=<optimized out>, name=0x7f6494007a88 "x9.seed.bitcoinstats.com", statp=0x7f64a97fadb8) at res_query.c:591
[#5](/bitcoin-bitcoin/5/) __GI___libc_res_nsearch (statp=0x7f64a97fadb8, name=name@entry=0x7f6494007a88 "x9.seed.bitcoinstats.com", class=class@entry=1, type=type@entry=62321, answer=answer@entry=0x7f64a97f8770 "\341+\203\200", anslen=anslen@entry=2048, answerp=answerp@entry=0x7f64a97f8fe0, answerp2=answerp2@entry=0x7f64a97f8ff0, nanswerp2=nanswerp2@entry=0x7f64a97f8fa0, resplen2=resplen2@entry=0x7f64a97f8fb0, answerp2_malloced=answerp2_malloced@entry=0x7f64a97f8fc0) at res_query.c:421
[#6](/bitcoin-bitcoin/6/) 0x00007f64cc31dc73 in _nss_dns_gethostbyname4_r (name=name@entry=0x7f6494007a88 "x9.seed.bitcoinstats.com", pat=pat@entry=0x7f64a97f9600, buffer=buffer@entry=0x7f64a97f9090 "_\267\060u", buflen=buflen@entry=1064, errnop=errnop@entry=0x7f64a97f95d0, herrnop=herrnop@entry=0x7f64a97f9630, ttlp=ttlp@entry=0x0) at nss_dns/dns-host.c:315
[#7](/bitcoin-bitcoin/7/) 0x00007f64d3e3d226 in gaih_inet (name=<optimized out>, name@entry=0x7f6494007a88 "x9.seed.bitcoinstats.com", service=<optimized out>, req=req@entry=0x7f64a97f98b0, pai=pai@entry=0x7f64a97f9740, naddrs=naddrs@entry=0x7f64a97f9730) at ../sysdeps/posix/getaddrinfo.c:858
[#8](/bitcoin-bitcoin/8/) 0x00007f64d3e4052d in __GI_getaddrinfo (name=0x7f6494007a88 "x9.seed.bitcoinstats.com", service=0x0, hints=0x7f64a97f98b0, pai=0x7f64a97f98a8) at ../sysdeps/posix/getaddrinfo.c:2414
[#9](/bitcoin-bitcoin/9/) 0x000055e5fd430206 in LookupIntern (pszName=0x7f6494007a88 "x9.seed.bitcoinstats.com", vIP=std::vector of length 0, capacity 0, nMaxSolutions=0, fAllowLookup=<optimized out>) at netbase.cpp:85
[#10](/bitcoin-bitcoin/10/) 0x000055e5fd430578 in LookupHost (pszName=<optimized out>, vIP=std::vector of length 0, capacity 0, nMaxSolutions=nMaxSolutions@entry=0, fAllowLookup=fAllowLookup@entry=true) at netbase.cpp:128
[#11](/bitcoin-bitcoin/11/) 0x000055e5fd26e899 in CConnman::ThreadDNSAddressSeed (this=0x55e5ffa47f70) at net.cpp:1613
[#12](/bitcoin-bitcoin/12/) 0x000055e5fd2537bb in operator() (this=0x7f64a97f9e70) at /usr/include/c++/4.8/functional:2471
[#13](/bitcoin-bitcoin/13/) TraceThread<std::function<void ()> >(char const*, std::function<void ()>) (name=0x55e5fd582f7e "dnsseed", func=...) at util.h:302
[#14](/bitcoin-bitcoin/14/) 0x000055e5fd285c3f in _M_invoke<0ul, 1ul> (this=<optimized out>) at /usr/include/c++/4.8/functional:1732
[#15](/bitcoin-bitcoin/15/) operator() (this=<optimized out>) at /usr/include/c++/4.8/functional:1720
[#16](/bitcoin-bitcoin/16/) std::thread::_Impl<std::_Bind_simple<void (*(char const*, std::function<void ()>))(char const*, std::function<void ()>)> >::_M_run() (this=<optimized out>) at /usr/include/c++/4.8/thread:115
[#17](/bitcoin-bitcoin/17/) 0x00007f64d4920a60 in ?? () from /usr/lib/x86_64-linux-gnu/libstdc++.so.6
[#18](/bitcoin-bitcoin/18/) 0x00007f64d413d184 in start_thread (arg=0x7f64a97fa700) at pthread_create.c:312
[#19](/bitcoin-bitcoin/19/) 0x00007f64d3e6abed in clone () at ../sysdeps/unix/sysv/linux/x86_64/clone.S:111
Thread 1 (Thread 0x7f64d640b780 (LWP 16288)):
[#0](/bitcoin-bitcoin/0/) 0x00007f64d413e65b in pthread_join (threadid=140070317172480, thread_return=0x0) at pthread_join.c:92
[#1](/bitcoin-bitcoin/1/) 0x00007f64d4920857 in std::thread::join() () from /usr/lib/x86_64-linux-gnu/libstdc++.so.6
[#2](/bitcoin-bitcoin/2/) 0x000055e5fd2840dd in CConnman::Stop (this=this@entry=0x55e5ffa47f70) at net.cpp:2408
[#3](/bitcoin-bitcoin/3/) 0x000055e5fd284428 in CConnman::~CConnman (this=0x55e5ffa47f70, __in_chrg=<optimized out>) at net.cpp:2455
[#4](/bitcoin-bitcoin/4/) 0x000055e5fd233731 in operator() (this=<optimized out>, __ptr=0x55e5ffa47f70) at /usr/include/c++/4.8/bits/unique_ptr.h:67
[#5](/bitcoin-bitcoin/5/) reset (__p=0x55e5ffa47f70, this=0x55e5fd96d990 <g_connman>) at /usr/include/c++/4.8/bits/unique_ptr.h:262
[#6](/bitcoin-bitcoin/6/) Shutdown () at init.cpp:198
[#7](/bitcoin-bitcoin/7/) 0x000055e5fd2269a0 in AppInit (argc=1, argv=0x7ffecae4a298) at bitcoind.cpp:183
[#8](/bitcoin-bitcoin/8/) 0x000055e5fd21a7ef in main (argc=1, argv=0x7ffecae4a298) at bitcoind.cpp:195